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RBKS ribokinase [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111174933, updated on 15-Mar-2024

Summary

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Gene symbol
RBKS
Gene description
ribokinase
See related
Ensembl:ENSDLEG00000020926
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See RBKS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098029.1 (22669635..22744807)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160868.1 (22671290..22746507)

NW_022098029.1Genomic Context describing neighboring genes Neighboring gene serine/arginine-rich splicing factor 5-like Neighboring gene BRISC and BRCA1 A complex member 2 Neighboring gene mitochondrial import receptor subunit TOM6 homolog pseudogene Neighboring gene cAMP-regulated phosphoprotein 19 pseudogene Neighboring gene mitochondrial ribosomal protein L33 Neighboring gene solute carrier family 4 member 1 adaptor protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-ribose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribokinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098029.1 Reference ASM228892v3 Primary Assembly

    Range
    22669635..22744807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022574179.2 → XP_022429887.1  ribokinase isoform X3

    UniProtKB/TrEMBL
    A0A2Y9NEJ4
    Related
    ENSDLEP00000029300.1, ENSDLET00000032190.1
    Conserved Domains (1) summary
    cl00192
    Location:26 → 267
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...

  2. XM_022574178.2 → XP_022429886.1  ribokinase isoform X2

    UniProtKB/TrEMBL
    A0A2Y9NAD0
    Related
    ENSDLEP00000029303.1, ENSDLET00000032193.1
    Conserved Domains (1) summary
    cl00192
    Location:26 → 269
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...

  3. XM_022574177.2 → XP_022429885.1  ribokinase isoform X1

    UniProtKB/TrEMBL
    A0A2Y9N6J3
    Related
    ENSDLEP00000029298.1, ENSDLET00000032188.1
    Conserved Domains (1) summary
    TIGR02152
    Location:26 → 322
    D_ribokin_bact; ribokinase

  4. XM_022574180.2 → XP_022429888.1  ribokinase isoform X4

    UniProtKB/TrEMBL
    A0A2Y9NKR1
    Related
    ENSDLEP00000029307.1, ENSDLET00000032197.1
    Conserved Domains (1) summary
    TIGR02152
    Location:7 → 295
    D_ribokin_bact; ribokinase
Nucleotide Protein
Heading Accession and Version

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