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MGAT5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111172696, updated on 15-Mar-2024

Summary

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Gene symbol
MGAT5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSDLEG00000017965
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See MGAT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098076.1 (306410..674751)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160862.1 (306410..674761)

NW_022098076.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene glycine cleavage system H protein, mitochondrial-like Neighboring gene histone H3.3-like Neighboring gene uncharacterized LOC115802132 Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 163

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098076.1 Reference ASM228892v3 Primary Assembly

    Range
    306410..674751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022569565.2 → XP_022425273.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MTI2
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  2. XM_022569570.2 → XP_022425278.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MTI2
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  3. XM_022569567.2 → XP_022425275.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MTI2
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  4. XM_022569566.2 → XP_022425274.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MTI2
    Related
    ENSDLEP00000024738.1, ENSDLET00000027223.1
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  5. XM_022569568.2 → XP_022425276.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MTI2
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  6. XM_022569572.2 → XP_022425280.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MTI2
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  7. XM_022569571.2 → XP_022425279.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MTI2
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  8. XM_022569569.2 → XP_022425277.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MTI2
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  9. XM_022569573.2 → XP_022425281.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X2

    UniProtKB/TrEMBL
    A0A2Y9MWG6
    Conserved Domains (1) summary
    pfam15024
    Location:58 → 612
    Glyco_transf_18; Glycosyltransferase family 18

  10. XM_022569574.2 → XP_022425282.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X3

    UniProtKB/TrEMBL
    A0A2Y9N1L5
    Conserved Domains (1) summary
    pfam15024
    Location:45 → 599
    Glyco_transf_18; Glycosyltransferase family 18

RNA

  1. XR_002643989.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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