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HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111172427, updated on 15-Mar-2024

Summary

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Gene symbol
HOGA1
Gene description
4-hydroxy-2-oxoglutarate aldolase 1
See related
Ensembl:ENSDLEG00000015555
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See HOGA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098057.1 (30245698..30270368, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160861.1 (30247022..30271691, complement)

NW_022098057.1Genomic Context describing neighboring genes Neighboring gene arginine vasopressin induced 1 Neighboring gene phosphatidylinositol 4-kinase type 2 alpha Neighboring gene MORN repeat containing 4 Neighboring gene chromosome unknown C10orf62 homolog Neighboring gene ankyrin repeat domain 2 Neighboring gene ubiquitin domain containing 1 Neighboring gene uncharacterized LOC111172433

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-hydroxy-tetrahydrodipicolinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-hydroxy-2-oxoglutarate aldolase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098057.1 Reference ASM228892v3 Primary Assembly

    Range
    30245698..30270368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022569133.1 → XP_022424841.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MV86
    Related
    ENSDLEP00000021400.1, ENSDLET00000023567.1
    Conserved Domains (1) summary
    cd00408
    Location:38 → 318
    DHDPS-like; Dihydrodipicolinate synthase family

  2. XM_022569135.2 → XP_022424843.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A2Y9N6I6
    Conserved Domains (1) summary
    cd00408
    Location:16 → 264
    DHDPS-like; Dihydrodipicolinate synthase family

  3. XM_022569134.1 → XP_022424842.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2Y9N0G2
    Conserved Domains (1) summary
    cd00408
    Location:38 → 278
    DHDPS-like; Dihydrodipicolinate synthase family

RNA

  1. XR_002643938.1 RNA Sequence

  2. XR_002643937.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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