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HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111171441, updated on 15-Mar-2024

Summary

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Gene symbol
HS3ST1
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 1
See related
Ensembl:ENSDLEG00000015791
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See HS3ST1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098069.1 (48555854..48586601)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160859.1 (44388054..44418514)

NW_022098069.1Genomic Context describing neighboring genes Neighboring gene RAB28, member RAS oncogene family Neighboring gene small nucleolar RNA U83B Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene Neighboring gene cytokine dependent hematopoietic cell linker

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098069.1 Reference ASM228892v3 Primary Assembly

    Range
    48555854..48586601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030760098.1 → XP_030615958.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A2Y9MP20
    Conserved Domains (1) summary
    pfam00685
    Location:58 → 295
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_022566996.2 → XP_022422704.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A2Y9MP20
    Conserved Domains (1) summary
    pfam00685
    Location:58 → 295
    Sulfotransfer_1; Sulfotransferase domain

  3. XM_022566997.1 → XP_022422705.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A2Y9MP20
    Related
    ENSDLEP00000021752.1, ENSDLET00000023948.1
    Conserved Domains (1) summary
    pfam00685
    Location:58 → 295
    Sulfotransfer_1; Sulfotransferase domain

  4. XM_022566998.1 → XP_022422706.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A2Y9MP20
    Conserved Domains (1) summary
    pfam00685
    Location:58 → 295
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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