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CHAT choline O-acetyltransferase [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111169892, updated on 15-Mar-2024

Summary

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Gene symbol
CHAT
Gene description
choline O-acetyltransferase
See related
Ensembl:ENSDLEG00000010526
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See CHAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098057.1 (46244849..46295155, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019161019.1 (1603607..1653914)

NW_022098057.1Genomic Context describing neighboring genes Neighboring gene oxoglutarate dehydrogenase L Neighboring gene chromosome unknown C10orf53 homolog Neighboring gene solute carrier family 18 member A3 Neighboring gene ERCC excision repair 6, chromatin remodeling factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098057.1 Reference ASM228892v3 Primary Assembly

    Range
    46244849..46295155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022564496.1 → XP_022420204.1  choline O-acetyltransferase

    UniProtKB/TrEMBL
    A0A2Y9MD98
    Related
    ENSDLEP00000014603.1, ENSDLET00000016124.1
    Conserved Domains (1) summary
    pfam00755
    Location:24 → 608
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein
Heading Accession and Version

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