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HS6ST2 heparan sulfate 6-O-sulfotransferase 2 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111169622, updated on 15-Mar-2024

Summary

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Gene symbol
HS6ST2
Gene description
heparan sulfate 6-O-sulfotransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098089.1 (2071402..2360612, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019161013.1 (2072196..2361409, complement)

NW_022098089.1Genomic Context describing neighboring genes Neighboring gene RAP2C, member of RAS oncogene family Neighboring gene U6 spliceosomal RNA Neighboring gene muscleblind like splicing regulator 3 Neighboring gene cytochrome c oxidase subunit 7B, mitochondrial pseudogene Neighboring gene uncharacterized LOC111169625

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098089.1 Reference ASM228892v3 Primary Assembly

    Range
    2071402..2360612 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022563935.2 → XP_022419643.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9MR52
    Conserved Domains (3) summary
    pfam03567
    Location:225 → 490
    Sulfotransfer_2; Sulfotransferase family
    pfam11593
    Location:531 → 606
    Med3; Mediator complex subunit 3 fungal
    pfam15951
    Location:498 → 549
    MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus

  2. XM_022563934.2 → XP_022419642.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MKT9
    Conserved Domains (3) summary
    pfam03567
    Location:225 → 530
    Sulfotransfer_2; Sulfotransferase family
    pfam11593
    Location:571 → 646
    Med3; Mediator complex subunit 3 fungal
    pfam15951
    Location:538 → 589
    MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus
Nucleotide Protein
Heading Accession and Version

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