U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BCAN brevican [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111167098, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
BCAN
Gene description
brevican
See related
Ensembl:ENSDLEG00000020387
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BCAN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098061.1 (2786282..2804148)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160960.1 (2786403..2804272)

NW_022098061.1Genomic Context describing neighboring genes Neighboring gene G-patch domain containing 4 Neighboring gene hyaluronan and proteoglycan link protein 2 Neighboring gene nestin Neighboring gene cellular retinoic acid binding protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
brevican core protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098061.1 Reference ASM228892v3 Primary Assembly

    Range
    2786282..2804148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022559538.2 → XP_022415246.1  brevican core protein isoform X1

    UniProtKB/TrEMBL
    A0A2Y9M2G2
    Conserved Domains (7) summary
    cd00033
    Location:813 → 870
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03517
    Location:157 → 251
    Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
    cd03520
    Location:258 → 353
    Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
    pfam00008
    Location:648 → 677
    EGF; EGF-like domain
    cl02432
    Location:686 → 809
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl11960
    Location:49 → 158
    Ig; Immunoglobulin domain
    cl25836
    Location:475 → 633
    Retinal; Retinal protein

  2. XM_022559540.2 → XP_022415248.1  brevican core protein isoform X2

    UniProtKB/TrEMBL
    A0A2Y9MCZ7
    Conserved Domains (7) summary
    cd00033
    Location:799 → 856
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03517
    Location:157 → 251
    Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
    cd03520
    Location:258 → 353
    Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
    pfam00008
    Location:634 → 663
    EGF; EGF-like domain
    cl02432
    Location:672 → 795
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl11960
    Location:49 → 158
    Ig; Immunoglobulin domain
    cl25836
    Location:461 → 619
    Retinal; Retinal protein

  3. XM_022559539.2 → XP_022415247.1  brevican core protein isoform X1

    UniProtKB/TrEMBL
    A0A2Y9M2G2
    Related
    ENSDLEP00000028410.1, ENSDLET00000031212.1
    Conserved Domains (7) summary
    cd00033
    Location:813 → 870
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03517
    Location:157 → 251
    Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
    cd03520
    Location:258 → 353
    Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
    pfam00008
    Location:648 → 677
    EGF; EGF-like domain
    cl02432
    Location:686 → 809
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl11960
    Location:49 → 158
    Ig; Immunoglobulin domain
    cl25836
    Location:475 → 633
    Retinal; Retinal protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.