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FUT6 fucosyltransferase 6 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111166035, updated on 15-Mar-2024

Summary

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Gene symbol
FUT6
Gene description
fucosyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human all
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Genomic context

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See FUT6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098054.1 (3672230..3675674)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160955.1 (3651061..3654505)

NW_022098054.1Genomic Context describing neighboring genes Neighboring gene vimentin type intermediate filament associated coiled-coil protein Neighboring gene NADH:ubiquinone oxidoreductase subunit A11 Neighboring gene neurturin Neighboring gene dihydrouridine synthase 3 like Neighboring gene proline rich 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: alpha-(1,3)-fucosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098054.1 Reference ASM228892v3 Primary Assembly

    Range
    3672230..3675674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030764482.1 → XP_030620342.1  LOW QUALITY PROTEIN: alpha-(1,3)-fucosyltransferase 6

    UniProtKB/TrEMBL
    A0A7F8KJC6
    Conserved Domains (2) summary
    pfam00852
    Location:191 → 343
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:61 → 171
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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