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RGN regucalcin [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111165549, updated on 15-Mar-2024

Summary

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Gene symbol
RGN
Gene description
regucalcin
See related
Ensembl:ENSDLEG00000020035
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See RGN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098050.1 (11196714..11217404)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160949.1 (7326679..7347370)

NW_022098050.1Genomic Context describing neighboring genes Neighboring gene jade family PHD finger 3 Neighboring gene olfactory receptor 2J3-like Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene NADH:ubiquinone oxidoreductase subunit B11 Neighboring gene RNA binding motif protein 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gluconolactonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-ascorbic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regucalcin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098050.1 Reference ASM228892v3 Primary Assembly

    Range
    11196714..11217404
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022556370.1 → XP_022412078.1  regucalcin

    UniProtKB/TrEMBL
    A0A2Y9LRT5
    Conserved Domains (1) summary
    pfam08450
    Location:18 → 266
    SGL; SMP-30/Gluconolaconase/LRE-like region

  2. XM_022556372.1 → XP_022412080.1  regucalcin

    UniProtKB/TrEMBL
    A0A2Y9LRT5
    Conserved Domains (1) summary
    pfam08450
    Location:18 → 266
    SGL; SMP-30/Gluconolaconase/LRE-like region

  3. XM_022556373.2 → XP_022412081.1  regucalcin

    UniProtKB/TrEMBL
    A0A2Y9LRT5
    Related
    ENSDLEP00000027824.1, ENSDLET00000030578.1
    Conserved Domains (1) summary
    pfam08450
    Location:18 → 266
    SGL; SMP-30/Gluconolaconase/LRE-like region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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