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EXT1 exostosin glycosyltransferase 1 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111165183, updated on 15-Mar-2024

Summary

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Gene symbol
EXT1
Gene description
exostosin glycosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See EXT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098047.1 (5553116..5842311, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160944.1 (5553783..5842809, complement)

NW_022098047.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111165205 Neighboring gene mediator complex subunit 30 Neighboring gene mitochondrial import inner membrane translocase subunit TIM14 pseudogene Neighboring gene uncharacterized LOC111165186 Neighboring gene sterile alpha motif domain containing 12 Neighboring gene zinc finger C2HC domain-containing protein 1A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098047.1 Reference ASM228892v3 Primary Assembly

    Range
    5553116..5842311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022555553.2 → XP_022411261.1  exostosin-1

    UniProtKB/TrEMBL
    A0A2Y9LRE1
    Conserved Domains (2) summary
    pfam03016
    Location:110 → 396
    Exostosin; Exostosin family
    pfam09258
    Location:480 → 725
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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Gene LinkOut

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