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CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111163996, updated on 15-Mar-2024

Summary

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Gene symbol
CSGALNACT2
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 2
See related
Ensembl:ENSDLEG00000006393
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See CSGALNACT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098038.1 (151002..200889, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160930.1 (151036..200923, complement)

NW_022098038.1Genomic Context describing neighboring genes Neighboring gene RasGEF domain family member 1A Neighboring gene uncharacterized LOC115803708 Neighboring gene ret proto-oncogene Neighboring gene BMS1 ribosome biogenesis factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098038.1 Reference ASM228892v3 Primary Assembly

    Range
    151002..200889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022553263.1 → XP_022408971.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9LJN7
    Related
    ENSDLEP00000008728.1, ENSDLET00000009637.1
    Conserved Domains (1) summary
    cl11394
    Location:122 → 516
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_022553267.1 → XP_022408975.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0A2Y9LHH0
    Conserved Domains (1) summary
    cl11394
    Location:140 → 389
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_022553264.1 → XP_022408972.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9LPJ0
    Conserved Domains (1) summary
    cl11394
    Location:122 → 327
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_022553266.1 → XP_022408974.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9LPJ0
    Conserved Domains (1) summary
    cl11394
    Location:122 → 327
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RNA

  1. XR_002641902.1 RNA Sequence

  2. XR_002641901.1 RNA Sequence

  3. XR_002641899.1 RNA Sequence

  4. XR_002641898.1 RNA Sequence

  5. XR_002641900.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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