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UMOD uromodulin [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111163502, updated on 15-Mar-2024

Summary

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Gene symbol
UMOD
Gene description
uromodulin
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See UMOD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098040.1 (26261539..26276243, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160926.1 (10727194..10741898, complement)

NW_022098040.1Genomic Context describing neighboring genes Neighboring gene rho-related GTP-binding protein RhoG-like Neighboring gene G protein-coupled receptor 139 Neighboring gene glycoprotein 2 Neighboring gene acyl-coenzyme A synthetase ACSM4, mitochondrial-like Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene uncharacterized LOC115803763 Neighboring gene acyl-coenzyme A synthetase ACSM1, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neutrophil migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uromodulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098040.1 Reference ASM228892v3 Primary Assembly

    Range
    26261539..26276243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022552231.1 → XP_022407939.1  uromodulin

    UniProtKB/TrEMBL
    A0A2Y9LE23
    Conserved Domains (4) summary
    smart00179
    Location:110 → 151
    EGF_CA; Calcium-binding EGF-like domain
    smart00241
    Location:336 → 585
    ZP; Zona pellucida (ZP) domain
    pfam07645
    Location:67 → 101
    EGF_CA; Calcium-binding EGF domain
    pfam12947
    Location:37 → 65
    EGF_3; EGF domain
Nucleotide Protein
Heading Accession and Version

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