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FCN3 ficolin 3 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111163250, updated on 15-Mar-2024

Summary

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Gene symbol
FCN3
Gene description
ficolin 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human all
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Genomic context

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See FCN3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098043.1 (2406135..2410855)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160925.1 (2406556..2411276)

NW_022098043.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 3 Neighboring gene CD164 molecule like 2 Neighboring gene mitogen-activated protein kinase kinase kinase 6 Neighboring gene synaptotagmin like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ficolin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098043.1 Reference ASM228892v3 Primary Assembly

    Range
    2406135..2410855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022551797.1 → XP_022407505.1  LOW QUALITY PROTEIN: ficolin-3

    UniProtKB/TrEMBL
    A0A2Y9LCZ1
    Conserved Domains (2) summary
    pfam01391
    Location:19 → 50
    Collagen; Collagen triple helix repeat (20 copies)
    cd00087
    Location:62 → 269
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
Nucleotide Protein
Heading Accession and Version

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