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GALE UDP-galactose-4-epimerase [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111163230, updated on 15-Mar-2024

Summary

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Gene symbol
GALE
Gene description
UDP-galactose-4-epimerase
See related
Ensembl:ENSDLEG00000010756
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See GALE in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098043.1 (5258109..5263831)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160925.1 (5259837..5264421)

NW_022098043.1Genomic Context describing neighboring genes Neighboring gene alpha-L-fucosidase 1 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase Neighboring gene lysophospholipase 2 Neighboring gene PITH domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose 4-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactose catabolic process via UDP-galactose IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose 4-epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098043.1 Reference ASM228892v3 Primary Assembly

    Range
    5258109..5263831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022551772.2 → XP_022407480.1  UDP-glucose 4-epimerase isoform X1

    UniProtKB/TrEMBL
    A0A2Y9LCW6
    Related
    ENSDLEP00000014632.1, ENSDLET00000016155.1
    Conserved Domains (1) summary
    cd05247
    Location:4 → 266
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

  2. XM_022551773.2 → XP_022407481.1  UDP-glucose 4-epimerase isoform X1

    UniProtKB/TrEMBL
    A0A2Y9LCW6
    Conserved Domains (1) summary
    cd05247
    Location:4 → 266
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

  3. XM_022551774.1 → XP_022407482.1  UDP-glucose 4-epimerase isoform X2

    UniProtKB/TrEMBL
    A0A2Y9LKA0
    Related
    ENSDLEP00000014620.1, ENSDLET00000016141.1
    Conserved Domains (1) summary
    cd05247
    Location:4 → 338
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs
Nucleotide Protein
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