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RTN4R reticulon 4 receptor [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111162990, updated on 15-Mar-2024

Summary

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Gene symbol
RTN4R
Gene description
reticulon 4 receptor
See related
Ensembl:ENSDLEG00000020018
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See RTN4R in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098052.1 (8991772..9016766)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160923.1 (8993777..9018772)

NW_022098052.1Genomic Context describing neighboring genes Neighboring gene proline dehydrogenase 1, mitochondrial Neighboring gene DiGeorge syndrome critical region gene 6 like Neighboring gene coiled-coil domain containing 188 Neighboring gene zinc finger DHHC-type palmitoyltransferase 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
reticulon-4 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098052.1 Reference ASM228892v3 Primary Assembly

    Range
    8991772..9016766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022551353.1 → XP_022407061.1  reticulon-4 receptor

    UniProtKB/TrEMBL
    A0A2Y9LEB8
    Related
    ENSDLEP00000027800.1, ENSDLET00000030552.1
    Conserved Domains (4) summary
    sd00033
    Location:60 → 82
    LRR_RI; leucine-rich repeat [structural motif]
    pfam04094
    Location:332 → 417
    DUF390; Protein of unknown function (DUF390)
    cl15307
    Location:260 → 296
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    pfam13855
    Location:156 → 214
    LRR_8; Leucine rich repeat
Nucleotide Protein
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