U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC111151581 sarcoglycan alpha [ Enhydra lutris kenyoni (northern sea otter) ]

Gene ID: 111151581, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LOC111151581
Gene description
sarcoglycan alpha
See related
EnsemblRapid:ENSELKG00000004307
Gene type
protein coding
RefSeq status
MODEL
Organism
Enhydra lutris kenyoni (sub-species: kenyoni)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Enhydra
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC111151581 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM228890v2 (GCF_002288905.1) Unplaced Scaffold NW_019154110.1 (21660130..21670097, complement)

NW_019154110.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 92 Neighboring gene collagen type I alpha 1 chain Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene sterile alpha motif domain containing 14

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019154110 Unplaced Scaffold Reference ASM228890v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Enhydra lutris kenyoni Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228890v2 Primary Assembly

Genomic

  1. NW_019154110.1 Reference ASM228890v2 Primary Assembly

    Range
    21660130..21670097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022509654.1 → XP_022365362.1  alpha-sarcoglycan

    UniProtKB/TrEMBL
    A0A2Y9JW83
    Related
    ENSELKP00000005687.1, ENSELKT00000006353.1
    Conserved Domains (1) summary
    pfam05510
    Location:30 → 353
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases