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LOC111134558 alpha-1,2-mannosyltransferase ALG9-like [ Crassostrea virginica (eastern oyster) ]

Gene ID: 111134558, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111134558
Gene description
alpha-1,2-mannosyltransferase ALG9-like
See related
EnsemblRapid:LOC111134558
Gene type
protein coding
RefSeq status
MODEL
Organism
Crassostrea virginica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea
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Genomic context

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See LOC111134558 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
100 current C_virginica-3.0 (GCF_002022765.2) 5 NC_035784.1 (63974830..63987542, complement)

Chromosome 5 - NC_035784.1Genomic Context describing neighboring genes Neighboring gene interleukin-1 receptor-associated kinase 4-like Neighboring gene transfer RNA leucine (anticodon CAG) Neighboring gene propionyl-CoA carboxylase beta chain, mitochondrial-like Neighboring gene beta-1,4-galactosyltransferase galt-1-like Neighboring gene uncharacterized LOC111133325 Neighboring gene trihelix transcription factor GT-4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035784.1 Chromosome 5 Reference C_virginica-3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,2-mannosyltransferase ALG9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crassostrea virginica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_virginica-3.0 Primary Assembly

Genomic

  1. NC_035784.1 Reference C_virginica-3.0 Primary Assembly

    Range
    63974830..63987542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022483685.1 → XP_022339393.1  alpha-1,2-mannosyltransferase ALG9-like

    UniProtKB/TrEMBL
    A0A8B8EIW9
    Related
    XP_022339393.1, XM_022483685.1
    Conserved Domains (1) summary
    pfam03901
    Location:47 → 466
    Glyco_transf_22; Alg9-like mannosyltransferase family
Nucleotide Protein
Heading Accession and Version

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