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LOC111124692 kin of IRRE-like protein 1 [ Crassostrea virginica (eastern oyster) ]

Gene ID: 111124692, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111124692
Gene description
kin of IRRE-like protein 1
See related
EnsemblRapid:LOC111124692
Gene type
protein coding
RefSeq status
MODEL
Organism
Crassostrea virginica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea
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Genomic context

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See LOC111124692 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
23
Annotation release Status Assembly Chr Location
100 current C_virginica-3.0 (GCF_002022765.2) 3 NC_035782.1 (54558647..54594064, complement)

Chromosome 3 - NC_035782.1Genomic Context describing neighboring genes Neighboring gene cell adhesion molecule 2-like Neighboring gene dopamine D2-like receptor Neighboring gene nephrin-like Neighboring gene craniofacial development protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035782.1 Chromosome 3 Reference C_virginica-3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crassostrea virginica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_virginica-3.0 Primary Assembly

Genomic

  1. NC_035782.1 Reference C_virginica-3.0 Primary Assembly

    Range
    54558647..54594064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022467795.1 → XP_022323503.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8D7H8
    Related
    XP_022323503.1, XM_022467795.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  2. XM_022467796.1 → XP_022323504.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8D7H8
    Related
    XP_022323504.1, XM_022467796.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  3. XM_022467799.1 → XP_022323507.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8D7H8
    Related
    XP_022323507.1, XM_022467799.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  4. XM_022467798.1 → XP_022323506.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8D7H8
    Related
    XP_022323506.1, XM_022467798.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  5. XM_022467805.1 → XP_022323513.1  kin of IRRE-like protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B8D5X1
    Related
    XP_022323513.1, XM_022467805.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  6. XM_022467803.1 → XP_022323511.1  kin of IRRE-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B8D7H8
    Related
    XP_022323511.1, XM_022467803.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  7. XM_022467804.1 → XP_022323512.1  kin of IRRE-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B8D5X1
    Related
    XP_022323512.1, XM_022467804.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  8. XM_022467794.1 → XP_022323502.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8D7H8
    Related
    XP_022323502.1, XM_022467794.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  9. XM_022467800.1 → XP_022323508.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8D7H8
    Related
    XP_022323508.1, XM_022467800.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  10. XM_022467802.1 → XP_022323510.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8D7H8
    Related
    XP_022323510.1, XM_022467802.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain

  11. XM_022467801.1 → XP_022323509.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8D7H8
    Related
    XP_022323509.1, XM_022467801.1
    Conserved Domains (3) summary
    smart00410
    Location:31 → 131
    IG_like; Immunoglobulin like
    pfam13927
    Location:327 → 393
    Ig_3; Immunoglobulin domain
    cl11960
    Location:412 → 507
    Ig; Immunoglobulin domain
Nucleotide Protein
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