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LOC111119818 GPI mannosyltransferase 2-like [ Crassostrea virginica (eastern oyster) ]

Gene ID: 111119818, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111119818
Gene description
GPI mannosyltransferase 2-like
See related
EnsemblRapid:LOC111119818
Gene type
protein coding
RefSeq status
MODEL
Organism
Crassostrea virginica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea
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Genomic context

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See LOC111119818 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
100 current C_virginica-3.0 (GCF_002022765.2) 1 NC_035780.1 (6379352..6383718)

Chromosome 1 - NC_035780.1Genomic Context describing neighboring genes Neighboring gene microfibrillar-associated protein 1-like Neighboring gene transcriptional adapter 3-B-like Neighboring gene uncharacterized LOC111112007 Neighboring gene pleckstrin homology domain-containing family F member 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035780.1 Chromosome 1 Reference C_virginica-3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crassostrea virginica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_virginica-3.0 Primary Assembly

Genomic

  1. NC_035780.1 Reference C_virginica-3.0 Primary Assembly

    Range
    6379352..6383718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022460329.1 → XP_022316037.1  GPI mannosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A8B8CJM1
    Related
    XP_022316037.1, XM_022460329.1
    Conserved Domains (1) summary
    cl21590
    Location:9 → 532
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases