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LOC111118003 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like [ Crassostrea virginica (eastern oyster) ]

Gene ID: 111118003, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111118003
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like
See related
EnsemblRapid:LOC111118003
Gene type
protein coding
RefSeq status
MODEL
Organism
Crassostrea virginica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea
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Genomic context

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See LOC111118003 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
100 current C_virginica-3.0 (GCF_002022765.2) 2 NC_035781.1 (13840018..13845529)

Chromosome 2 - NC_035781.1Genomic Context describing neighboring genes Neighboring gene MAP kinase-interacting serine/threonine-protein kinase 1-like Neighboring gene calcium homeostasis endoplasmic reticulum protein-like Neighboring gene uncharacterized LOC111118016 Neighboring gene LYR motif-containing protein 1-like Neighboring gene uncharacterized LOC111118015 Neighboring gene uncharacterized LOC111118017

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035781.1 Chromosome 2 Reference C_virginica-3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crassostrea virginica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_virginica-3.0 Primary Assembly

Genomic

  1. NC_035781.1 Reference C_virginica-3.0 Primary Assembly

    Range
    13840018..13845529
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022457267.1 → XP_022312975.1  LOW QUALITY PROTEIN: TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like

    UniProtKB/TrEMBL
    A0A8B8CBD1
    Related
    XP_022312975.1, XM_022457267.1
    Conserved Domains (1) summary
    cd00143
    Location:61 → 352
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version

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