U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC111110494 conserved oligomeric Golgi complex subunit 5-like [ Crassostrea virginica (eastern oyster) ]

Gene ID: 111110494, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC111110494
Gene description
conserved oligomeric Golgi complex subunit 5-like
See related
EnsemblRapid:LOC111110494
Gene type
protein coding
RefSeq status
MODEL
Organism
Crassostrea virginica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC111110494 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
23
Annotation release Status Assembly Chr Location
100 current C_virginica-3.0 (GCF_002022765.2) 8 NC_035787.1 (479531..496098, complement)

Chromosome 8 - NC_035787.1Genomic Context describing neighboring genes Neighboring gene wnt inhibitory factor 1-like Neighboring gene fibrinogen-like protein 1 Neighboring gene tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like Neighboring gene serine/threonine-protein kinase WNK3-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_035787.1 Chromosome 8 Reference C_virginica-3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
conserved oligomeric Golgi complex subunit 5-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Crassostrea virginica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_virginica-3.0 Primary Assembly

Genomic

  1. NC_035787.1 Reference C_virginica-3.0 Primary Assembly

    Range
    479531..496098 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022447012.1 → XP_022302720.1  conserved oligomeric Golgi complex subunit 5-like isoform X4

    UniProtKB/TrEMBL
    A0A8B8BH78
    Related
    XP_022302720.1, XM_022447012.1
    Conserved Domains (1) summary
    pfam10392
    Location:18 → 139
    COG5; Golgi transport complex subunit 5

  2. XM_022447009.1 → XP_022302717.1  conserved oligomeric Golgi complex subunit 5-like isoform X2

    UniProtKB/TrEMBL
    A0A8B8BH69
    Related
    XP_022302717.1, XM_022447009.1
    Conserved Domains (1) summary
    pfam10392
    Location:18 → 139
    COG5; Golgi transport complex subunit 5

  3. XM_022447010.1 → XP_022302718.1  conserved oligomeric Golgi complex subunit 5-like isoform X3

    UniProtKB/TrEMBL
    A0A8B8BHH7
    Related
    XP_022302718.1, XM_022447010.1
    Conserved Domains (1) summary
    pfam10392
    Location:18 → 139
    COG5; Golgi transport complex subunit 5

  4. XM_022447008.1 → XP_022302716.1  conserved oligomeric Golgi complex subunit 5-like isoform X1

    UniProtKB/TrEMBL
    A0A8B8BIC8
    Related
    XP_022302716.1, XM_022447008.1
    Conserved Domains (1) summary
    pfam10392
    Location:18 → 139
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases