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HS3ST6 heparan sulfate-glucosamine 3-sulfotransferase 6 [ Canis lupus familiaris (dog) ]

Gene ID: 111096478, updated on 15-Mar-2024

Summary

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Gene symbol
HS3ST6
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 6
See related
Ensembl:ENSCAFG00845018590
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See HS3ST6 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (39312648..39319120)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (40235317..40241791)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (39440600..39447074)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (38989414..38995886)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (38961746..38968219)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L3 like Neighboring gene methionine sulfoxide reductase B1 Neighboring gene meiosis specific with OB-fold Neighboring gene fumarylacetoacetate hydrolase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: heparan sulfate glucosamine 3-O-sulfotransferase 6; heparan sulfate glucosamine 3-O-sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    39312648..39319120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038667719.1 → XP_038523647.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

    UniProtKB/TrEMBL
    A0A8C0JHB5, A0A8C0NVR0, A0A8I3P7P4
    Related
    ENSCAFP00845025722.1, ENSCAFT00845032869.1
    Conserved Domains (1) summary
    pfam00685
    Location:91 → 326
    Sulfotransfer_1; Sulfotransferase domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    38989414..38995886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480426.1 → XP_038336354.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

    Conserved Domains (1) summary
    pfam00685
    Location:91 → 326
    Sulfotransfer_1; Sulfotransferase domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    38961746..38968219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038603014.1 → XP_038458942.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    39440600..39447074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038538886.1 → XP_038394814.1  LOW QUALITY PROTEIN: heparan sulfate glucosamine 3-O-sulfotransferase 6

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    40235317..40241791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038534078.1 → XP_038390006.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

    UniProtKB/TrEMBL
    A0A8C0PP83, A0A8P0SQ01
    Conserved Domains (1) summary
    pfam00685
    Location:91 → 326
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
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