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PPIAP88 peptidylprolyl isomerase A pseudogene 88 [ Homo sapiens (human) ]

Gene ID: 111082971, updated on 17-Sep-2024

Summary

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Official Symbol
PPIAP88provided by HGNC
Official Full Name
peptidylprolyl isomerase A pseudogene 88provided by HGNC
Primary source
HGNC:HGNC:53712
See related
Ensembl:ENSG00000227350 AllianceGenome:HGNC:53712
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See PPIAP88 in Genome Data Viewer
Location:
9q31.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (107543151..107543616, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (119714941..119715406, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (110305432..110305897, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20158 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:110251563-110251762 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20159 Neighboring gene uncharacterized LOC105376206 Neighboring gene KLF transcription factor 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28751 Neighboring gene uncharacterized LOC105376205 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:110350158-110350682 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:110349632-110350157 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:110394581-110395218 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:110399294-110399842 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:110399843-110400391 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:110412164-110412336 Neighboring gene RNA, U6 small nuclear 996, pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_104360 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_104366 Neighboring gene uncharacterized LOC105376207

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_065983.1 

    Range
    101..566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    107543151..107543616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    119714941..119715406 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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