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LOC111044599 carotenoid isomerooxygenase [ Nilaparvata lugens (brown planthopper) ]

Gene ID: 111044599, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111044599
Gene description
carotenoid isomerooxygenase
See related
EnsemblRapid:LOC111044599
Gene type
protein coding
RefSeq status
MODEL
Organism
Nilaparvata lugens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Auchenorrhyncha; Fulgoroidea; Delphacidae; Delphacinae; Nilaparvata
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Genomic context

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See LOC111044599 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM1435652v1 (GCF_014356525.1) 1 NC_052504.1 (6346646..6376180, complement)
100 previous assembly NilLug1.0 (GCF_000757685.1) Unplaced Scaffold NW_019105753.1 (242353..268084)

Chromosome 1 - NC_052504.1Genomic Context describing neighboring genes Neighboring gene TAR DNA-binding protein 43 Neighboring gene CDGSH iron-sulfur domain-containing protein 3, mitochondrial Neighboring gene lysozyme Neighboring gene lysozyme 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nilaparvata lugens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1435652v1 Primary Assembly

Genomic

  1. NC_052504.1 Reference ASM1435652v1 Primary Assembly

    Range
    6346646..6376180 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039428951.1 → XP_039284885.1  carotenoid isomerooxygenase

    Related
    XP_039284885.1, XM_039428951.1
    Conserved Domains (2) summary
    pfam03055
    Location:337 → 849
    RPE65; Retinal pigment epithelial membrane protein
    NF033900
    Location:228 → 269
    T4SS_IcmE_DotG; type IVB secretion system protein DotG/IcmE
Nucleotide Protein
Heading Accession and Version

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