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LOC111019306 hydroxyproline O-galactosyltransferase HPGT1 [ Momordica charantia (bitter melon) ]

Gene ID: 111019306, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111019306
Gene description
hydroxyproline O-galactosyltransferase HPGT1
Gene type
protein coding
RefSeq status
MODEL
Organism
Momordica charantia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Genomic context

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See LOC111019306 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104563.1 (432536..437191, complement)

NW_019104563.1Genomic Context describing neighboring genes Neighboring gene germin-like protein subfamily 1 member 1 Neighboring gene ethylene-responsive transcription factor WRI1-like Neighboring gene DEAD-box ATP-dependent RNA helicase 10-like Neighboring gene formin-like protein 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019104563 Unplaced Scaffold Reference ASM199503v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase HPGT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM199503v1

Genomic

  1. NW_019104563.1 Reference ASM199503v1

    Range
    432536..437191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022295650.1 → XP_022151342.1  hydroxyproline O-galactosyltransferase HPGT1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1DD78
    Conserved Domains (1) summary
    cl26217
    Location:1 → 336
    DUF4094; Domain of unknown function (DUF4094)

  2. XM_022295652.1 → XP_022151344.1  hydroxyproline O-galactosyltransferase HPGT1 isoform X2

    UniProtKB/TrEMBL
    A0A6J1DCT3
    Conserved Domains (1) summary
    cl26217
    Location:1 → 250
    DUF4094; Domain of unknown function (DUF4094)
Nucleotide Protein Strain
Heading Accession and Version

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