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LOC111011197 putative pentatricopeptide repeat-containing protein At1g03510 [ Momordica charantia (bitter melon) ]

Gene ID: 111011197, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111011197
Gene description
putative pentatricopeptide repeat-containing protein At1g03510
Gene type
protein coding
RefSeq status
MODEL
Organism
Momordica charantia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC111011197 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104503.1 (360542..361815, complement)

NW_019104503.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111011196 Neighboring gene external alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial-like Neighboring gene uncharacterized LOC111011226 Neighboring gene probable galacturonosyltransferase 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019104503 Unplaced Scaffold Reference ASM199503v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative pentatricopeptide repeat-containing protein At1g03510

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM199503v1

Genomic

  1. NW_019104503.1 Reference ASM199503v1

    Range
    360542..361815 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022284883.1 → XP_022140575.1  putative pentatricopeptide repeat-containing protein At1g03510

    UniProtKB/TrEMBL
    A0A6J1CFE4
    Conserved Domains (2) summary
    sd00004
    Location:248 → 275
    PPR; PPR repeat [structural motif]
    cl25449
    Location:11 → 423
    PPR_2; PPR repeat family
Nucleotide Protein Strain
Heading Accession and Version

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