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LOC111008688 alpha-1,4-glucan-protein synthase [UDP-forming] 2-like [ Momordica charantia (bitter melon) ]

Gene ID: 111008688, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111008688
Gene description
alpha-1,4-glucan-protein synthase [UDP-forming] 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Momordica charantia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Genomic context

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See LOC111008688 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104497.1 (910128..912477)

NW_019104497.1Genomic Context describing neighboring genes Neighboring gene cleavage stimulation factor subunit 50 Neighboring gene COBRA-like protein 4 Neighboring gene squamosa promoter-binding-like protein 6 Neighboring gene MADS-box protein CMB1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019104497 Unplaced Scaffold Reference ASM199503v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,4-glucan-protein synthase [UDP-forming] 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM199503v1

Genomic

  1. NW_019104497.1 Reference ASM199503v1

    Range
    910128..912477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022281448.1 → XP_022137140.1  alpha-1,4-glucan-protein synthase [UDP-forming] 2-like

    UniProtKB/TrEMBL
    A0A6J1C5U2
    Conserved Domains (1) summary
    PLN03180
    Location:4 → 348
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein Strain
Heading Accession and Version

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