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LOC111007356 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 [ Momordica charantia (bitter melon) ]

Gene ID: 111007356, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111007356
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Momordica charantia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Genomic context

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See LOC111007356 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104488.1 (402786..419532)

NW_019104488.1Genomic Context describing neighboring genes Neighboring gene 50S ribosomal protein L13, chloroplastic Neighboring gene zinc finger BED domain-containing protein RICESLEEPER 1-like Neighboring gene bidirectional sugar transporter SWEET2 Neighboring gene uncharacterized LOC111012091

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019104488 Unplaced Scaffold Reference ASM199503v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM199503v1

Genomic

  1. NW_019104488.1 Reference ASM199503v1

    Range
    402786..419532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022279712.1 → XP_022135404.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A6J1C2M1
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 930
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  2. XM_022279720.1 → XP_022135412.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A6J1C2M1
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 930
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  3. XM_022279704.1 → XP_022135396.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A6J1C2M1
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 930
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Nucleotide Protein Strain
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