U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC111005450 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [ Momordica charantia (bitter melon) ]

Gene ID: 111005450, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC111005450
Gene description
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
Gene type
protein coding
RefSeq status
MODEL
Organism
Momordica charantia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC111005450 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104492.1 (5025233..5040391, complement)

NW_019104492.1Genomic Context describing neighboring genes Neighboring gene mRNA-decapping enzyme-like protein Neighboring gene casparian strip membrane protein 1 Neighboring gene vacuolar protein sorting-associated protein 55 homolog Neighboring gene NAC domain-containing protein 90-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019104492 Unplaced Scaffold Reference ASM199503v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM199503v1

Genomic

  1. NW_019104492.1 Reference ASM199503v1

    Range
    5025233..5040391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022276946.1 → XP_022132638.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X1

    UniProtKB/TrEMBL
    A0A6J1BWU1
    Conserved Domains (3) summary
    COG3914
    Location:317 → 850
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    sd00006
    Location:334 → 362
    TPR; TPR repeat [structural motif]
    cl26002
    Location:55 → 434
    TPR_11; TPR repeat

  2. XM_022276945.1 → XP_022132637.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X1

    UniProtKB/TrEMBL
    A0A6J1BWU1
    Conserved Domains (3) summary
    COG3914
    Location:317 → 850
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    sd00006
    Location:334 → 362
    TPR; TPR repeat [structural motif]
    cl26002
    Location:55 → 434
    TPR_11; TPR repeat

  3. XM_022276948.1 → XP_022132640.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X3

    UniProtKB/TrEMBL
    A0A6J1BT14
    Conserved Domains (3) summary
    COG3914
    Location:317 → 848
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    sd00006
    Location:157 → 185
    TPR; TPR repeat [structural motif]
    cl26002
    Location:55 → 432
    TPR_11; TPR repeat

  4. XM_022276947.1 → XP_022132639.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X2

    UniProtKB/TrEMBL
    A0A6J1BTP4
    Conserved Domains (3) summary
    COG3914
    Location:317 → 849
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    sd00006
    Location:334 → 362
    TPR; TPR repeat [structural motif]
    cl26002
    Location:55 → 434
    TPR_11; TPR repeat

  5. XM_022276944.1 → XP_022132636.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY isoform X1

    UniProtKB/TrEMBL
    A0A6J1BWU1
    Conserved Domains (3) summary
    COG3914
    Location:317 → 850
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    sd00006
    Location:334 → 362
    TPR; TPR repeat [structural motif]
    cl26002
    Location:55 → 434
    TPR_11; TPR repeat
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases