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LOC111004054 O-glucosyltransferase rumi homolog [ Pieris rapae (cabbage white) ]

Gene ID: 111004054, updated on 30-Nov-2023

Summary

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Gene symbol
LOC111004054
Gene description
O-glucosyltransferase rumi homolog
See related
EnsemblRapid:ENSPRPG00005011335
Gene type
protein coding
RefSeq status
MODEL
Organism
Pieris rapae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Pieridae; Pierinae; Pieris
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Genomic context

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See LOC111004054 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ilPieRapa1.1 (GCF_905147795.1) 23 NC_059531.1 (2604189..2608182)
100 previous assembly P_rapae_3842_assembly_v2 (GCF_001856805.1) Unplaced Scaffold NW_019093129.1 (128867..132935, complement)

Chromosome 23 - NC_059531.1Genomic Context describing neighboring genes Neighboring gene NAD(P) transhydrogenase, mitochondrial-like Neighboring gene uncharacterized LOC123690254 Neighboring gene putative nuclease HARBI1 Neighboring gene isocitrate dehydrogenase [NADP] cytoplasmic Neighboring gene serine incorporator TMS1 Neighboring gene Glucose transporter 4 enhancer factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The molecular genetic basis of herbivory between butterflies and their host plants. Nallu S, et al. Nat Ecol Evol, 2018 Sep. PMID 30076351, Free PMC Article
  2. Genomic adaptation to agricultural environments: cabbage white butterflies (Pieris rapae) as a case study. Sikkink KL, et al. BMC Genomics, 2017 May 26. PMID 28549454, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-glucosyltransferase rumi homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pieris rapae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilPieRapa1.1 Primary Assembly

Genomic

  1. NC_059531.1 Reference ilPieRapa1.1 Primary Assembly

    Range
    2604189..2608182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022274877.2 → XP_022130569.2  O-glucosyltransferase rumi homolog

    Related
    ENSPRPP00005017677.1, ENSPRPT00005022007.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases