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LOC110989761 EGF domain-specific O-linked N-acetylglucosamine transferase-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110989761, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110989761
Gene description
EGF domain-specific O-linked N-acetylglucosamine transferase-like
See related
EnsemblRapid:LOC110989761
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110989761 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091668.1 (66700..83510, complement)

NW_019091668.1Genomic Context describing neighboring genes Neighboring gene epithelial chloride channel protein-like Neighboring gene alpha-2B adrenergic receptor-like Neighboring gene uncharacterized LOC110989768 Neighboring gene orphan steroid hormone receptor 2-like Neighboring gene hemK methyltransferase family member 1-like Neighboring gene uncharacterized LOC110989755 Neighboring gene cyclin-related protein FAM58A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091668 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091668.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    66700..83510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022254374.1 → XP_022110066.1  EGF domain-specific O-linked N-acetylglucosamine transferase-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7ZY98
    Related
    XP_022110066.1, XM_022254374.1
    Conserved Domains (1) summary
    pfam04577
    Location:284 → 509
    DUF563; Protein of unknown function (DUF563)

  2. XM_022254373.1 → XP_022110065.1  EGF domain-specific O-linked N-acetylglucosamine transferase-like isoform X1

    UniProtKB/TrEMBL
    A0A8B7ZZB2
    Related
    XP_022110065.1, XM_022254373.1
    Conserved Domains (1) summary
    pfam04577
    Location:296 → 521
    DUF563; Protein of unknown function (DUF563)

  3. XM_022254375.1 → XP_022110067.1  EGF domain-specific O-linked N-acetylglucosamine transferase-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7ZY98
    Related
    XP_022110067.1, XM_022254375.1
    Conserved Domains (1) summary
    pfam04577
    Location:284 → 509
    DUF563; Protein of unknown function (DUF563)

  4. XM_022254376.1 → XP_022110068.1  EGF domain-specific O-linked N-acetylglucosamine transferase-like isoform X3

    UniProtKB/TrEMBL
    A0A8B7ZWZ2
    Related
    XP_022110068.1, XM_022254376.1
    Conserved Domains (1) summary
    pfam04577
    Location:161 → 386
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
Heading Accession and Version

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