U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110989661 beta-1,3-N-acetylglucosaminyltransferase radical fringe-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110989661, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110989661
Gene description
beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
See related
EnsemblRapid:LOC110989661
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110989661 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091661.1 (228928..263472)

NW_019091661.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110989660 Neighboring gene polycystic kidney disease protein 1-like 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019091661 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,3-N-acetylglucosaminyltransferase radical fringe-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091661.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    228928..263472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022254205.1 → XP_022109897.1  beta-1,3-N-acetylglucosaminyltransferase radical fringe-like isoform X1

    UniProtKB/TrEMBL
    A0A8B7ZXS5
    Related
    XP_022109897.1, XM_022254205.1
    Conserved Domains (1) summary
    cl21608
    Location:162 → 302
    Galactosyl_T; Galactosyltransferase

  2. XM_022254206.1 → XP_022109898.1  beta-1,3-N-acetylglucosaminyltransferase radical fringe-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7ZWG7
    Related
    XP_022109898.1, XM_022254206.1
    Conserved Domains (1) summary
    cl21608
    Location:162 → 248
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases