U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110989436 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110989436, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110989436
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like
See related
EnsemblRapid:LOC110989436
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110989436 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091362.1 (2292015..2339575, complement)

NW_019091362.1Genomic Context describing neighboring genes Neighboring gene syntaxin-17-like Neighboring gene very low-density lipoprotein receptor-like Neighboring gene RNA-binding protein 28-like Neighboring gene DENN domain-containing protein 5A-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019091362 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091362.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    2292015..2339575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022253830.1 → XP_022109522.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like isoform X3

    UniProtKB/TrEMBL
    A0A8B7ZWQ4
    Related
    XP_022109522.1, XM_022253830.1
    Conserved Domains (2) summary
    pfam15024
    Location:203 → 780
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:8 → 112
    DUF4525; Domain of unknown function (DUF4525)

  2. XM_022253846.1 → XP_022109538.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like isoform X5

    UniProtKB/TrEMBL
    A0A8B7ZVF6
    Related
    XP_022109538.1, XM_022253846.1
    Conserved Domains (2) summary
    pfam15024
    Location:209 → 773
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:8 → 112
    DUF4525; Domain of unknown function (DUF4525)

  3. XM_022253825.1 → XP_022109517.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7ZWP8
    Related
    XP_022109517.1, XM_022253825.1
    Conserved Domains (2) summary
    pfam15024
    Location:209 → 784
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:8 → 112
    DUF4525; Domain of unknown function (DUF4525)

  4. XM_022253838.1 → XP_022109530.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like isoform X4

    UniProtKB/TrEMBL
    A0A8B7ZXQ3
    Related
    XP_022109530.1, XM_022253838.1
    Conserved Domains (2) summary
    pfam15024
    Location:209 → 775
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:8 → 112
    DUF4525; Domain of unknown function (DUF4525)

  5. XM_022253815.1 → XP_022109507.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like isoform X1

    UniProtKB/TrEMBL
    A0A8B7ZWN8
    Related
    XP_022109507.1, XM_022253815.1
    Conserved Domains (2) summary
    pfam15024
    Location:209 → 786
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:8 → 112
    DUF4525; Domain of unknown function (DUF4525)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases