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LOC110989340 galactoside 3(4)-L-fucosyltransferase-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110989340, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110989340
Gene description
galactoside 3(4)-L-fucosyltransferase-like
See related
EnsemblRapid:LOC110989340
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110989340 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091639.1 (184473..188776)

NW_019091639.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-fold modifier-conjugating enzyme 1 Neighboring gene ATP-dependent RNA helicase cgh-1-like Neighboring gene ubiquitin carboxyl-terminal hydrolase 2-like Neighboring gene uncharacterized LOC110989354

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091639 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactoside 3(4)-L-fucosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091639.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    184473..188776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022253661.1 → XP_022109353.1  galactoside 3(4)-L-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A8B7ZUW5
    Related
    XP_022109353.1, XM_022253661.1
    Conserved Domains (2) summary
    pfam00852
    Location:231 → 372
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:140 → 209
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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