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LOC110987877 beta-(1,2)-xylosyltransferase-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110987877, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110987877
Gene description
beta-(1,2)-xylosyltransferase-like
See related
EnsemblRapid:LOC110987877
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110987877 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091564.1 (79371..98679, complement)

NW_019091564.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110987890 Neighboring gene uncharacterized LOC110987898 Neighboring gene RRP12-like protein Neighboring gene metabotropic glutamate receptor 1-like Neighboring gene metabotropic glutamate receptor-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091564 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-(1,2)-xylosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091564.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    79371..98679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022251004.1 → XP_022106696.1  beta-(1,2)-xylosyltransferase-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7ZT94
    Related
    XP_022106696.1, XM_022251004.1
    Conserved Domains (1) summary
    pfam04577
    Location:377 → 548
    DUF563; Protein of unknown function (DUF563)

  2. XM_022251005.1 → XP_022106697.1  beta-(1,2)-xylosyltransferase-like isoform X3

    UniProtKB/TrEMBL
    A0A8B7ZNQ8
    Related
    XP_022106697.1, XM_022251005.1
    Conserved Domains (1) summary
    pfam04577
    Location:323 → 494
    DUF563; Protein of unknown function (DUF563)

  3. XM_022251002.1 → XP_022106694.1  beta-(1,2)-xylosyltransferase-like isoform X1

    UniProtKB/TrEMBL
    A0A8B7ZMN4
    Related
    XP_022106694.1, XM_022251002.1
    Conserved Domains (1) summary
    pfam04577
    Location:380 → 551
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
Heading Accession and Version

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