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LOC110982496 beta-1,4-galactosyltransferase 7-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110982496, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110982496
Gene description
beta-1,4-galactosyltransferase 7-like
See related
EnsemblRapid:LOC110982496
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110982496 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091442.1 (484712..503138, complement)

NW_019091442.1Genomic Context describing neighboring genes Neighboring gene platelet glycoprotein Ib alpha chain-like Neighboring gene uncharacterized LOC110982487 Neighboring gene uncharacterized LOC110982486 Neighboring gene homeobox protein ceh-1-like Neighboring gene NK1 transcription factor-related protein 2-like Neighboring gene homeobox protein Hmx-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091442 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091442.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    484712..503138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022240937.1 → XP_022096629.1  beta-1,4-galactosyltransferase 7-like

    UniProtKB/TrEMBL
    A0A8B7YTK9
    Related
    XP_022096629.1, XM_022240937.1
    Conserved Domains (1) summary
    cl11394
    Location:81 → 306
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_022240936.1 → XP_022096628.1  beta-1,4-galactosyltransferase 7-like

    UniProtKB/TrEMBL
    A0A8B7YTK9
    Related
    XP_022096628.1, XM_022240936.1
    Conserved Domains (1) summary
    cl11394
    Location:81 → 306
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_022240938.1 → XP_022096630.1  beta-1,4-galactosyltransferase 7-like

    UniProtKB/TrEMBL
    A0A8B7YTK9
    Related
    XP_022096630.1, XM_022240938.1
    Conserved Domains (1) summary
    cl11394
    Location:81 → 306
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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