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LOC110981883 beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110981883, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110981883
Gene description
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
See related
EnsemblRapid:LOC110981883
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110981883 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091432.1 (1435729..1460865, complement)

NW_019091432.1Genomic Context describing neighboring genes Neighboring gene TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like Neighboring gene LYR motif-containing protein 1-like Neighboring gene dynein heavy chain 3, axonemal-like Neighboring gene fibrillin-1-like Neighboring gene uncharacterized LOC110981781

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091432 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091432.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    1435729..1460865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022239880.1 → XP_022095572.1  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like

    UniProtKB/TrEMBL
    A0A8B7YSA6
    Related
    XP_022095572.1, XM_022239880.1
    Conserved Domains (1) summary
    pfam02434
    Location:126 → 391
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

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