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LOC110981330 beta-1,4-galactosyltransferase 6-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110981330, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110981330
Gene description
beta-1,4-galactosyltransferase 6-like
See related
EnsemblRapid:LOC110981330
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110981330 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091426.1 (3344..70450)

NW_019091426.1Genomic Context describing neighboring genes Neighboring gene probable aminopeptidase NPEPL1 Neighboring gene vacuolar protein sorting-associated protein 4A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091426 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 6-like; uncharacterized protein LOC110981330

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091426.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    3344..70450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022238828.1 → XP_022094520.1  uncharacterized protein LOC110981330 isoform X1

    UniProtKB/TrEMBL
    A0A8B7YPZ3
    Related
    XP_022094520.1, XM_022238828.1
    Conserved Domains (1) summary
    cd00899
    Location:249 → 471
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_022238830.1 → XP_022094522.1  beta-1,4-galactosyltransferase 6-like isoform X3

    UniProtKB/TrEMBL
    A0A8B7YPC7
    Related
    XP_022094522.1, XM_022238830.1
    Conserved Domains (1) summary
    cd00899
    Location:226 → 448
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_022238829.1 → XP_022094521.1  uncharacterized protein LOC110981330 isoform X2

    UniProtKB/TrEMBL
    A0A8B7YT38
    Related
    XP_022094521.1, XM_022238829.1
    Conserved Domains (1) summary
    cd00899
    Location:248 → 470
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_022238831.1 → XP_022094523.1  beta-1,4-galactosyltransferase 6-like isoform X4

    UniProtKB/TrEMBL
    A0A8B7YMN3
    Related
    XP_022094523.1, XM_022238831.1
    Conserved Domains (1) summary
    cd00899
    Location:225 → 447
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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