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LOC110979775 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110979775, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110979775
Gene description
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like
See related
EnsemblRapid:LOC110979775
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110979775 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091411.1 (1458129..1475366)

NW_019091411.1Genomic Context describing neighboring genes Neighboring gene exosome complex exonuclease RRP44-like Neighboring gene thymosin beta-like Neighboring gene alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3-like Neighboring gene DNA-directed RNA polymerase I subunit RPA49-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091411 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091411.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    1458129..1475366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022235827.1 → XP_022091519.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform X1

    UniProtKB/TrEMBL
    A0A8B7YE36
    Related
    XP_022091519.1, XM_022235827.1
    Conserved Domains (3) summary
    sd00006
    Location:219 → 246
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:549 → 1026
    Glyco_transf_41; Glycosyl transferase family 41
    cl26002
    Location:15 → 458
    TPR_11; TPR repeat

  2. XM_022235828.1 → XP_022091520.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7YGJ5
    Related
    XP_022091520.1, XM_022235828.1
    Conserved Domains (3) summary
    sd00006
    Location:218 → 245
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:548 → 1025
    Glyco_transf_41; Glycosyl transferase family 41
    cl26002
    Location:25 → 457
    TPR_11; TPR repeat
Nucleotide Protein
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