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LOC110978328 carbohydrate sulfotransferase 11-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110978328, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110978328
Gene description
carbohydrate sulfotransferase 11-like
See related
EnsemblRapid:LOC110978328
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110978328 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091398.1 (748809..752886)

NW_019091398.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110978326 Neighboring gene ubiquinol-cytochrome-c reductase complex assembly factor 1-like Neighboring gene lipid droplet-associated hydrolase-like Neighboring gene carbohydrate sulfotransferase 11-like Neighboring gene 28S ribosomal protein S14, mitochondrial-like Neighboring gene uncharacterized LOC110978324

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091398 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091398.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    748809..752886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022233244.1 → XP_022088936.1  carbohydrate sulfotransferase 11-like

    UniProtKB/TrEMBL
    A0A8B7Y9A7
    Related
    XP_022088936.1, XM_022233244.1
    Conserved Domains (1) summary
    pfam03567
    Location:130 → 367
    Sulfotransfer_2; Sulfotransferase family

  2. XM_022233243.1 → XP_022088935.1  carbohydrate sulfotransferase 11-like

    UniProtKB/TrEMBL
    A0A8B7Y9A7
    Related
    XP_022088935.1, XM_022233243.1
    Conserved Domains (1) summary
    pfam03567
    Location:130 → 367
    Sulfotransfer_2; Sulfotransferase family

  3. XM_022233246.1 → XP_022088938.1  carbohydrate sulfotransferase 11-like

    UniProtKB/TrEMBL
    A0A8B7Y9A7
    Related
    XP_022088938.1, XM_022233246.1
    Conserved Domains (1) summary
    pfam03567
    Location:130 → 367
    Sulfotransfer_2; Sulfotransferase family

  4. XM_022233248.1 → XP_022088940.1  carbohydrate sulfotransferase 11-like

    UniProtKB/TrEMBL
    A0A8B7Y9A7
    Related
    XP_022088940.1, XM_022233248.1
    Conserved Domains (1) summary
    pfam03567
    Location:130 → 367
    Sulfotransfer_2; Sulfotransferase family

  5. XM_022233245.1 → XP_022088937.1  carbohydrate sulfotransferase 11-like

    UniProtKB/TrEMBL
    A0A8B7Y9A7
    Related
    XP_022088937.1, XM_022233245.1
    Conserved Domains (1) summary
    pfam03567
    Location:130 → 367
    Sulfotransfer_2; Sulfotransferase family

  6. XM_022233247.1 → XP_022088939.1  carbohydrate sulfotransferase 11-like

    UniProtKB/TrEMBL
    A0A8B7Y9A7
    Related
    XP_022088939.1, XM_022233247.1
    Conserved Domains (1) summary
    pfam03567
    Location:130 → 367
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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