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LOC110977421 solute carrier family 25 member 48-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110977421, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110977421
Gene description
solute carrier family 25 member 48-like
See related
EnsemblRapid:LOC110977421
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110977421 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091390.1 (672274..680882, complement)

NW_019091390.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110977488 Neighboring gene histone H2A deubiquitinase MYSM1-like Neighboring gene general transcription factor IIF subunit 1-like Neighboring gene PDZ domain-containing protein GIPC3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091390 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carrier protein YMC2, mitochondrial-like; mitochondrial arginine transporter BAC2-like; solute carrier family 25 member 48-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091390.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    672274..680882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022231537.1 → XP_022087229.1  mitochondrial arginine transporter BAC2-like isoform X4

    UniProtKB/TrEMBL
    A0A8B7Y227
    Related
    XP_022087229.1, XM_022231537.1
    Conserved Domains (1) summary
    cl28162
    Location:146 → 218
    Mito_carr; Mitochondrial carrier protein

  2. XM_022231535.1 → XP_022087227.1  mitochondrial arginine transporter BAC2-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7Y3W1
    Related
    XP_022087227.1, XM_022231535.1
    Conserved Domains (1) summary
    cl28162
    Location:21 → 71
    Mito_carr; Mitochondrial carrier protein

  3. XM_022231534.1 → XP_022087226.1  solute carrier family 25 member 48-like isoform X1

    UniProtKB/TrEMBL
    A0A8B7Y5X5
    Related
    XP_022087226.1, XM_022231534.1
    Conserved Domains (2) summary
    pfam00153
    Location:21 → 98
    Mito_carr; Mitochondrial carrier protein
    cl28162
    Location:189 → 261
    Mito_carr; Mitochondrial carrier protein

  4. XM_022231536.1 → XP_022087228.1  carrier protein YMC2, mitochondrial-like isoform X3

    UniProtKB/TrEMBL
    A0A8B7Y225
    Related
    XP_022087228.1, XM_022231536.1
    Conserved Domains (1) summary
    cl28162
    Location:1 → 57
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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