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LOC110976978 GDP-fucose protein O-fucosyltransferase 2-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110976978, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110976978
Gene description
GDP-fucose protein O-fucosyltransferase 2-like
See related
EnsemblRapid:LOC110976978
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110976978 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091356.1 (2594216..2603209, complement)

NW_019091356.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 3, mitochondrial-like Neighboring gene branched-chain-amino-acid aminotransferase-like protein 2 Neighboring gene signal transducer and activator of transcription 5A-like Neighboring gene retinol dehydrogenase 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091356 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091356.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    2594216..2603209 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022230723.1 → XP_022086415.1  GDP-fucose protein O-fucosyltransferase 2-like isoform X1

    UniProtKB/TrEMBL
    A0A8B7Y287
    Related
    XP_022086415.1, XM_022230723.1
    Conserved Domains (1) summary
    cd11298
    Location:56 → 427
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2

  2. XM_022230733.1 → XP_022086425.1  GDP-fucose protein O-fucosyltransferase 2-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7Y297
    Related
    XP_022086425.1, XM_022230733.1
    Conserved Domains (1) summary
    cd11298
    Location:56 → 427
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
Nucleotide Protein
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