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LOC110976862 polypeptide N-acetylgalactosaminyltransferase-like 6 [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110976862, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110976862
Gene description
polypeptide N-acetylgalactosaminyltransferase-like 6
See related
EnsemblRapid:LOC110976862
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110976862 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091385.1 (2265329..2284625, complement)

NW_019091385.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis-associated protein 5-like Neighboring gene uncharacterized LOC110976861 Neighboring gene hyaluronan mediated motility receptor-like Neighboring gene WD repeat-containing protein on Y chromosome-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091385 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091385.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    2265329..2284625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022230507.1 → XP_022086199.1  polypeptide N-acetylgalactosaminyltransferase-like 6

    UniProtKB/TrEMBL
    A0A8B7XZ69
    Related
    XP_022086199.1, XM_022230507.1
    Conserved Domains (2) summary
    cd02510
    Location:178 → 477
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:493 → 624
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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