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LOC110976185 polypeptide N-acetylgalactosaminyltransferase 1-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110976185, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110976185
Gene description
polypeptide N-acetylgalactosaminyltransferase 1-like
See related
EnsemblRapid:LOC110976185
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110976185 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091356.1 (4784941..4795462)

NW_019091356.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase OSR1-like Neighboring gene S-acyl fatty acid synthase thioesterase, medium chain-like Neighboring gene monocarboxylate transporter 13-like Neighboring gene arachidonate 5-lipoxygenase-like Neighboring gene allene oxide synthase-lipoxygenase protein-like Neighboring gene thyrotropin-releasing hormone receptor-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091356 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091356.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    4784941..4795462
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022229270.1 → XP_022084962.1  polypeptide N-acetylgalactosaminyltransferase 1-like

    UniProtKB/TrEMBL
    A0A8B7XY63
    Related
    XP_022084962.1, XM_022229270.1
    Conserved Domains (2) summary
    cd02510
    Location:323 → 620
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:632 → 743
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_022229278.1 → XP_022084970.1  polypeptide N-acetylgalactosaminyltransferase 1-like

    UniProtKB/TrEMBL
    A0A8B7XY63
    Related
    XP_022084970.1, XM_022229278.1
    Conserved Domains (2) summary
    cd02510
    Location:323 → 620
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:632 → 743
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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