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LOC110975174 N-acetylgalactosaminyltransferase 7-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110975174, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110975174
Gene description
N-acetylgalactosaminyltransferase 7-like
See related
EnsemblRapid:LOC110975174
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110975174 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091373.1 (533127..554084)

NW_019091373.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110975188 Neighboring gene BTB/POZ domain-containing protein 17-like Neighboring gene uncharacterized LOC110975186 Neighboring gene programmed cell death protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091373 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091373.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    533127..554084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022227387.1 → XP_022083079.1  N-acetylgalactosaminyltransferase 7-like isoform X1

    UniProtKB/TrEMBL
    A0A8B7XQH5
    Related
    XP_022083079.1, XM_022227387.1
    Conserved Domains (2) summary
    cd02510
    Location:176 → 482
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:498 → 610
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_022227389.1 → XP_022083081.1  N-acetylgalactosaminyltransferase 7-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7XT26
    Related
    XP_022083081.1, XM_022227389.1
    Conserved Domains (2) summary
    cd02510
    Location:176 → 482
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:498 → 610
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_022227390.1 → XP_022083082.1  N-acetylgalactosaminyltransferase 7-like isoform X3

    UniProtKB/TrEMBL
    A0A8B7XSB1
    Related
    XP_022083082.1, XM_022227390.1
    Conserved Domains (2) summary
    cd02510
    Location:116 → 422
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:438 → 550
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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