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LOC110974033 conserved oligomeric Golgi complex subunit 5-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110974033, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110974033
Gene description
conserved oligomeric Golgi complex subunit 5-like
See related
EnsemblRapid:LOC110974033
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110974033 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091367.1 (164303..179991)

NW_019091367.1Genomic Context describing neighboring genes Neighboring gene selenocysteine-specific elongation factor-like Neighboring gene serine/arginine repetitive matrix protein 2-like Neighboring gene RNA helicase Mov10l1-like Neighboring gene E3 ubiquitin-protein ligase ARIH2-like Neighboring gene transfer RNA threonine (anticodon GGU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091367 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091367.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    164303..179991
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022225338.1 → XP_022081030.1  LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 5-like

    UniProtKB/TrEMBL
    A0A8B7XM35
    Related
    XP_022081030.1, XM_022225338.1
    Conserved Domains (2) summary
    pfam10392
    Location:17 → 139
    COG5; Golgi transport complex subunit 5
    cl07053
    Location:355 → 467
    Sin3_corepress; Sin3 family co-repressor
Nucleotide Protein
Heading Accession and Version

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