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LOC110969810 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110969810, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110969810
Gene description
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
See related
Ensembl:ENSAPOG00000017645
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Also known as
ddx27
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Genomic context

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See LOC110969810 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 5 NC_067117.1 (44104344..44115833, complement)

Chromosome 5 - NC_067117.1Genomic Context describing neighboring genes Neighboring gene low-density lipoprotein receptor class A domain-containing protein 2-like Neighboring gene uncharacterized LOC127534194 Neighboring gene coiled-coil domain containing 71 Neighboring gene uncharacterized LOC127534195 Neighboring gene phospholipid transfer protein Neighboring gene ketohexokinase-like Neighboring gene uncharacterized LOC127534196

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067117.1 Chromosome 5 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX27
Names
DEAD-box helicase 27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067117.1 Reference KAUST_Apoly_ChrSc

    Range
    44104344..44115833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022219977.2 → XP_022075669.2  probable ATP-dependent RNA helicase DDX27 isoform X2

  2. XM_022219976.2 → XP_022075668.2  probable ATP-dependent RNA helicase DDX27 isoform X1

Nucleotide Protein
Heading Accession and Version

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