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rab22a RAB22A, member RAS oncogene family [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110969363, updated on 15-Mar-2024

Summary

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Gene symbol
rab22a
Gene description
RAB22A, member RAS oncogene family
See related
Ensembl:ENSAPOG00000011559
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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See rab22a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 5 NC_067117.1 (5308878..5323104, complement)

Chromosome 5 - NC_067117.1Genomic Context describing neighboring genes Neighboring gene adenomatosis polyposis coli down-regulated 1-like Neighboring gene vesicle-associated membrane protein-associated protein B/C-like Neighboring gene protein phosphatase 4, regulatory subunit 1-like Neighboring gene pre-miRNA 5'-monophosphate methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067117.1 Chromosome 5 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-22A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067117.1 Reference KAUST_Apoly_ChrSc

    Range
    5308878..5323104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022219431.2 → XP_022075123.1  ras-related protein Rab-22A

    UniProtKB/TrEMBL
    A0A3Q1HEU5
    Related
    ENSAPOP00000027205.1
    Conserved Domains (1) summary
    cd01860
    Location:5 → 167
    Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
Nucleotide Protein
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