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arl1 ADP-ribosylation factor-like 1 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110968042, updated on 15-Mar-2024

Summary

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Gene symbol
arl1
Gene description
ADP-ribosylation factor-like 1
See related
Ensembl:ENSAPOG00000002469
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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See arl1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 1 NC_067113.1 (55136167..55142822)

Chromosome 1 - NC_067113.1Genomic Context describing neighboring genes Neighboring gene FYVE, RhoGEF and PH domain-containing protein 4-like Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene DENN domain-containing protein 11-like Neighboring gene UTP20 small subunit processome component Neighboring gene solute carrier family 5 member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067113.1 Chromosome 1 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 1
Names
ADP ribosylation factor like GTPase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067113.1 Reference KAUST_Apoly_ChrSc

    Range
    55136167..55142822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022217845.2 → XP_022073537.1  ADP-ribosylation factor-like protein 1

    UniProtKB/TrEMBL
    A0A3Q1ECG1, A0A3Q1GXI7
    Related
    ENSAPOP00000021725.1
    Conserved Domains (1) summary
    cd04151
    Location:19 → 175
    Arl1; ADP ribosylation factor 1 (Arf1)
Nucleotide Protein
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