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recql5 RecQ helicase-like 5 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110956708, updated on 15-Mar-2024

Summary

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Gene symbol
recql5
Gene description
RecQ helicase-like 5
See related
Ensembl:ENSAPOG00000018549
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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See recql5 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 21 NC_067133.1 (25073697..25088975)

Chromosome 21 - NC_067133.1Genomic Context describing neighboring genes Neighboring gene uncharacterized si:ch73-364h19.1 Neighboring gene butyrophilin subfamily 3 member A3 Neighboring gene uncharacterized LOC110956709 Neighboring gene cerebellar degeneration-related protein 2-like Neighboring gene Rho GDP dissociation inhibitor (GDI) alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067133.1 Chromosome 21 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA unwinding involved in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent DNA helicase Q5
Names
RecQ like helicase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067133.1 Reference KAUST_Apoly_ChrSc

    Range
    25073697..25088975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022202351.2 → XP_022058043.2  ATP-dependent DNA helicase Q5

Nucleotide Protein
Heading Accession and Version

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